MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Parabacteroides goldsteinii
19428wG3_P14
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 123
bases: 6,785,295 bps
CDS: 5,393
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 70
misc RNA:
Total features: 5,473
Total number of protein coding genes annotated/found:
5,393
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5019|JADGKT010000090.1
SEQF5019_05310
Genome Viewer
NA
AA
381/127
119-499
hypothetical protein
SEQF5019|JADGKT010000062.1
SEQF5019_04725
Genome Viewer
NA
AA
213/71
121-333
hypothetical protein
SEQF5019|JADGKT010000049.1
SEQF5019_04168
Genome Viewer
NA
AA
2034/678
122-2155
1-deoxy-D-xylulose-5-phosphate synthase
SEQF5019|JADGKT010000006.1
SEQF5019_04779
Genome Viewer
NA
AA
1908/636
122-2029
hypothetical protein
SEQF5019|JADGKT010000106.1
SEQF5019_00003
Genome Viewer
NA
AA
306/102
134-439
hypothetical protein
SEQF5019|JADGKT010000023.1
SEQF5019_02224
Genome Viewer
NA
AA
717/239
142-858
Tyrosine recombinase XerD
SEQF5019|JADGKT010000078.1
SEQF5019_04943
Genome Viewer
NA
AA
1977/659
142-2118
hypothetical protein
SEQF5019|JADGKT010000058.1
SEQF5019_04493
Genome Viewer
NA
AA
879/293
146-1024
2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase
SEQF5019|JADGKT010000020.1
SEQF5019_01889
Genome Viewer
NA
AA
1854/618
161-2014
2-oxoglutarate carboxylase large subunit
SEQF5019|JADGKT010000001.1
SEQF5019_01333
Genome Viewer
NA
AA
417/139
164-580
hypothetical protein
SEQF5019|JADGKT010000068.1
SEQF5019_04771
Genome Viewer
NA
AA
579/193
169-747
Thiol peroxidase
SEQF5019|JADGKT010000072.1
SEQF5019_04934
Genome Viewer
NA
AA
1557/519
175-1731
IS21 family transposase ISPpu7
SEQF5019|JADGKT010000009.1
SEQF5019_05329
Genome Viewer
NA
AA
756/252
176-931
hypothetical protein
SEQF5019|JADGKT010000012.1
SEQF5019_00317
Genome Viewer
NA
AA
1827/609
185-2011
Retaining alpha-galactosidase
SEQF5019|JADGKT010000037.1
SEQF5019_03534
Genome Viewer
NA
AA
483/161
193-675
hypothetical protein
SEQF5019|JADGKT010000038.1
SEQF5019_03578
Genome Viewer
NA
AA
444/148
194-637
hypothetical protein
SEQF5019|JADGKT010000055.1
SEQF5019_04451
Genome Viewer
NA
AA
1503/501
196-1698
hypothetical protein
SEQF5019|JADGKT010000069.1
SEQF5019_04776
Genome Viewer
NA
AA
810/270
226-1035
hypothetical protein
SEQF5019|JADGKT010000002.1
SEQF5019_02876
Genome Viewer
NA
AA
219/73
227-445
hypothetical protein
SEQF5019|JADGKT010000029.1
SEQF5019_02812
Genome Viewer
NA
AA
504/168
244-747
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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